I am a full Professor at the University Paris-Saclay. My research interests include data science and bioinformatics, biological data integration, reproducibilty of bioinformatics pipelines, scientific workflows, provenance, and ranking. 

Current activities

Research
I am the project coordinator of the ShareFAIR project that aims at sharing reliable protocols to transform datasets into gold standards, applied to Neuro-Vascular Pathologies. ShareFAIR involves 9 partners and is an axis of the PEPR "Santé Numérique".
I head the Bioinformatics group at LISN.
I am deputy director of the DATAIA institute and and I actively contributed to the labelisation of DATAIA as an « AI-cluster », pole of excellence in artificial intelligence research and training.  

Teaching
I coordinate the Master of Bioinformatics at the University Paris-Saclay and co-coordinate the M1-M2 master tracks BIBS - AMI2B.
I am the project co-coordinator of the SaclAI-School training program at the Paris-Saclay University, which aims to train everyone in Artificial Intelligence, from AI acculturation to Artificial Intelligence expertise.

News

New email

Paris-Saclay and LRI/LISN email adresses are currently unavailable, you can reach me at: This email address is being protected from spambots. You need JavaScript enabled to view it.

Paper accepted at NAR Genomics and Bioinformatics

Our paper on BioFlow-Insight: facilitating reuse of Nextflow workflows with structure reconstruction and visualization got accepted at NAR Genomics and Bioinformatics.

It has been selected as part of the Editor's choice articles.

Paper accepted at eScience 2024

Our paper on Reproducibility in Named Entity Recognition: A Case Study Analysis  got accepted at eScience 2024 (collaborative work with Nona Naderi and Carlos Cuevas Villarmin).

CNRS silver medal

I am happy to share that I have been awarded the CNRS silver medal in 2024: https://www.ins2i.cnrs.fr/fr/cnrsinfo/science-des-donnees-et-interdisciplinarite-sarah-cohen-boulakia-recompensee-par-le-cnrs.